User profiles for J. Černý
 | Jiri CernyInstitute of Biotechnology, Czech Academy of Sciences Verified email at ibt.cas.cz Cited by 6884 |
Non-covalent interactions in biomacromolecules
J Černý, P Hobza - Physical Chemistry Chemical Physics, 2007 - pubs.rsc.org
… Jiří Černý Jiří Černý studied organometallic chemistry with D. Dvořák at the Prague
Institute of Chemical Technology. He received his PhD in physical chemistry with P. …
Institute of Chemical Technology. He received his PhD in physical chemistry with P. …
Benchmark database of accurate (MP2 and CCSD (T) complete basis set limit) interaction energies of small model complexes, DNA base pairs, and amino acid pairs
P Jurečka, J Šponer, J Černý, P Hobza - Physical Chemistry Chemical …, 2006 - pubs.rsc.org
MP2 and CCSD(T) complete basis set (CBS) limit interaction energies and geometries for
more than 100 DNA base pairs, amino acid pairs and model complexes are for the first time …
more than 100 DNA base pairs, amino acid pairs and model complexes are for the first time …
Density functional theory augmented with an empirical dispersion term. Interaction energies and geometries of 80 noncovalent complexes compared with ab initio …
P Jurečka, J Černý, P Hobza… - Journal of computational …, 2007 - Wiley Online Library
Standard density functional theory (DFT) is augmented with a damped empirical dispersion
term. The damping function is optimized on a small, well balanced set of 22 van der Waals (…
term. The damping function is optimized on a small, well balanced set of 22 van der Waals (…
[HTML][HTML] Management Options for Ixodes ricinus-Associated Pathogens: A Review of Prevention Strategies
J Černý, G Lynn, J Hrnková, M Golovchenko… - International journal of …, 2020 - mdpi.com
Ticks are important human and animal parasites and vectors of many infectious disease
agents. Control of tick activity is an effective tool to reduce the risk of contracting tick-transmitted …
agents. Control of tick activity is an effective tool to reduce the risk of contracting tick-transmitted …
[HTML][HTML] COVID-19 and the immune system
J Paces, Z Strizova, S Daniel, J Cerny - Physiological research, 2020 - ncbi.nlm.nih.gov
A close interaction between the virus SARS-CoV-2 and the immune system of an individual
results in a diverse clinical manifestation of the COVID-19 disease. While adaptive immune …
results in a diverse clinical manifestation of the COVID-19 disease. While adaptive immune …
Scaled MP3 non‐covalent interaction energies agree closely with accurate CCSD (T) benchmark data
Scaled MP3 interaction energies calculated as a sum of MP2/CBS (complete basis set limit)
interaction energies and scaled third‐order energy contributions obtained in small or …
interaction energies and scaled third‐order energy contributions obtained in small or …
Prognostic value of the amount of dysfunctional but viable myocardium in revascularized patients with coronary artery disease and left ventricular dysfunction
J Meluzín, L Špinarová, J Černý, M Frélich… - Journal of the American …, 1998 - jacc.org
Objectives. The purpose of our study was to assess the prognostic importance of the amount
of dysfunctional but viable myocardium in revascularized patients with coronary artery …
of dysfunctional but viable myocardium in revascularized patients with coronary artery …
Quantum chemical benchmark energy and geometry database for molecular clusters and complex molecular systems (www. begdb. com): a users manual and …
Our previous benchmark CCSD(T)/ complete basis set limit calculations were collected into
a database named begdb - Benchmark Energy and Geometry DataBase. Web-based …
a database named begdb - Benchmark Energy and Geometry DataBase. Web-based …
When will RNA get its AlphaFold moment?
The protein structure prediction problem has been solved for many types of proteins by
AlphaFold. Recently, there has been considerable excitement to build off the success of …
AlphaFold. Recently, there has been considerable excitement to build off the success of …
T cell activation-associated epitopes of CD147 in regulation of the T cell response, and their definition by antibody affinity and antigen density
…, R Hüttinger, I Hilgert, E Prager, J Černý… - International …, 1999 - academic.oup.com
CD147 is a broadly expressed cell surface glycoprotein of the Ig superfamily whose expression
is up-regulated upon T cell activation. In order to elucidate a possible role of CD147 in T …
is up-regulated upon T cell activation. In order to elucidate a possible role of CD147 in T …